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Kernel Fusion and Inference Kernels: Squeezing Latency Out of GPUs

A deep dive into kernel fusion, custom kernels, and GPU-level optimizations for fast LLM inference.

December 5, 20252 min readBy Ugur Yildirim
High-performance GPU hardware with illuminated components.
Photo by Unsplash

Why Kernels Matter

Inference latency often comes from kernel overhead, not just model size.

Kernel fusion reduces memory transfers and improves throughput.

Common Fusion Targets

Layer norm, activation functions, and linear layers benefit from fusion.

Attention kernels are especially sensitive to memory bandwidth and fusion choices.

Custom Kernels in Production

Custom kernels can unlock major speedups but increase maintenance cost.

Use them when performance constraints justify the engineering effort.

Profiling and Bottleneck Detection

Use profiling tools to identify kernel hotspots and memory stalls.

Optimize the heaviest paths first for best ROI.

Deployment and Compatibility

Kernel optimizations may depend on specific GPU architectures.

Maintain fallbacks for older hardware and cloud instances.

Performance Validation

Track kernel-level speedups against real workloads, not just microbenchmarks.

Rollback to stable kernels if a new fusion introduces numerical drift or instability.

Profile across GPU generations to ensure optimizations do not regress on older hardware.

Maintain a kernel compatibility matrix so deployments stay predictable.

Use automated regression tests to catch kernel performance drops early.

Benchmark kernel changes in production-like environments to avoid lab-only gains.

Log numerical error checks alongside performance metrics to prevent silent accuracy loss.

Capture kernel launch overhead metrics to spot hidden regressions.

Validate memory usage patterns to avoid unexpected OOMs after kernel changes.

Keep a kernel change log so regressions can be traced quickly.

Profile end-to-end latency to ensure kernel gains translate to user impact.

Bundle kernels with versioned drivers so rollbacks are consistent.

Document known kernel limitations so teams avoid unsupported configurations.

Align kernel benchmarking with real batch sizes so results reflect production traffic.

Automate kernel selection based on hardware detection to avoid fragile manual configs.

Keep a small canary fleet so new kernels prove stability before full rollout.

FAQ: Kernel Fusion

Does fusion change model outputs? No, if implemented correctly.

Is it worth it for small models? Less so; benefits scale with model size.

What is the biggest risk? Kernel bugs that are hard to detect in QA.

About the author

Ugur Yildirim
Ugur Yildirim

Computer Programmer

He focuses on building application infrastructures.